Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secdf | ECHVI_RS05430 | Not Available | + | 1279132 - 1282101 | 107205.0 |
| hypothetical protein | ECHVI_RS05435 | Not Available | + | 1282368 - 1283033 | 25803.3 |
| hypothetical protein | ECHVI_RS22900 | Not Available | + | 1283126 - 1283539 | 15587.5 |
| hypothetical protein | ECHVI_RS05445 | Not Available | + | 1283680 - 1284339 | 25797.6 |
| sensor histidine kinase | ECHVI_RS05450 | Not Available | + | 1284345 - 1285103 | 28750.1 |
| response regulator transcription factor | ECHVI_RS05455 | Not Available | + | 1285267 - 1285893 | 24147.6 |
| oxidoreductase | ECHVI_RS05460 | Not Available | + | 1285894 - 1286925 | 38246.9 |
| srpbcc domain-containing protein | ECHVI_RS05465 | Not Available | - | 1286935 - 1287405 | 17519.2 |
| crp/fnr family transcriptional regulator | ECHVI_RS05470 | Not Available | - | 1287468 - 1288061 | 22850.5 |
| copper resistance protein nlpe n-terminal domain-containing protein | ECHVI_RS22905 | Not Available | + | 1288178 - 1289239 | 39757.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.