Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Psychroflexus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Psychroflexus |
| Species | Psychroflexus halocasei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
897300 bp
Thymine Count
882288 bp
Guanine Count
440814 bp
Cytosine Count
451198 bp
Genome Length
2671918 bp
Protein-coding Genes
2463 genes
Non-Coding Genes
39 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative sos response-associated peptidase yedk | SAMN05421540_10146 | Not Available | - | 55534 - 56268 | 28408.7 |
| hypothetical protein | SAMN05421540_10147 | Not Available | - | 56337 - 56546 | 7608.26 |
| type i restriction enzyme, r subunit | SAMN05421540_10148 | Not Available | + | 57167 - 59524 | 90059.9 |
| type i restriction enzyme m protein | SAMN05421540_10149 | Not Available | + | 59558 - 60988 | 54794.6 |
| type i restriction enzyme, s subunit | SAMN05421540_10150 | Not Available | + | 61041 - 62801 | 66468.4 |
| reverse transcriptase (rna-dependent dna polymerase) | SAMN05421540_10151 | Not Available | + | 62810 - 64276 | 57516.4 |
| reverse transcriptase (rna-dependent dna polymerase) | SAMN05421540_10152 | Not Available | + | 64273 - 66546 | 90528.3 |
| hypothetical protein | SAMN05421540_10153 | Not Available | + | 66999 - 67523 | 20604.7 |
| helix-turn-helix | SAMN05421540_10154 | Not Available | + | 67536 - 67907 | 14292.1 |
| hypothetical protein | SAMN05421540_10155 | Not Available | + | 67907 - 68344 | 16877.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
