Massilia timonae CCUG 45783

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia timonae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia timonae CCUG 45783

Accession NumberAGZI00000000.1

Gene Summary

Adenine Count

1046418 bp

Thymine Count

1041036 bp

Guanine Count

1987961 bp

Cytosine Count

1962985 bp

Genome Length

6038400 bp

Protein-coding Genes

5236 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
23s ribosomal rnaNot AvailableNot Available+1 - 2810Not Available
5s ribosomal rnaNot AvailableNot Available+78 - 189Not Available
tryptophan synthase alpha chainHMPREF9710_00001A4G4G3-1 - 78427605.1
5s ribosomal rnaNot AvailableNot Available+883 - 994Not Available
tryptophan synthase beta chainHMPREF9710_00002Q8XXY0-862 - 211845231.0
hypothetical proteinHMPREF9710_00003A4G4G1-2084 - 279425535.5
5s ribosomal rnaNot AvailableNot Available+2907 - 3018Not Available
5s ribosomal rnaNot AvailableNot Available+3012 - 3123Not Available
23s ribosomal rnaNot AvailableNot Available+3174 - 6063Not Available
trna pseudouridine synthase aHMPREF9710_00004A6T009-2815 - 361530087.9

Displaying genes 1 – 10 of 5315 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

307 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001463alpha-L-rhamnoseC6H12O5Chemical structure of alpha-L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.068473494Da
BASm00015534-hydroxy-6-methylpretetramideC20H15NO7Chemical structure of 4-hydroxy-6-methylpretetramideNot available
Average381.34Da
Monoisotopic381.0848518Da
BASm00016432,5-dichlorocyclohexa-2,5-dien-1,4-diolC6H6Cl2O2Chemical structure of 2,5-dichlorocyclohexa-2,5-dien-1,4-diolNot available
Average181.01Da
Monoisotopic179.9744848Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001785(2R,3R)-tartrateC4H6O6Chemical structure of (2R,3R)-tartrate87-69-4
Average150.0868Da
Monoisotopic150.0164379Da

Displaying 41–50 of 307 metabolites