Shinella sp. HZN7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusShinella
SpeciesShinella sp. HZN7
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shinella sp. HZN7

NZ_CP015737.1NZ_CP015741.1NZ_CP015748.1NZ_CP015739.1NZ_CP015745.1NZ_CP015742.1NZ_CP015736.1NZ_CP015746.1NZ_CP015738.1NZ_CP015744.1NZ_CP015747.1NZ_CP015740.1NZ_CP015743.1

Gene Summary

Adenine Count

102122 bp

Thymine Count

107513 bp

Guanine Count

206401 bp

Cytosine Count

204503 bp

Genome Length

620539 bp

Protein-coding Genes

586 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

13

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ydch family proteinshn_RS35500P55616-123029 - 12378028050.3
is1380 family transposaseshn_RS32220Not Available-124039 - 12537949736.3
crp/fnr family transcriptional regulatorshn_RS32225P24290+125679 - 12640726864.2
luxr c-terminal-related transcriptional regulatorshn_RS35505P74946-126626 - 12715019407.1
yeca family proteinshn_RS32230Not Available-127257 - 12782021032.3
ydch family proteinshn_RS32235P55504-127817 - 12938957478.6
ydch family proteinshn_RS32240Not Available-129438 - 12979312746.5
ydch family proteinshn_RS32245P55502-129790 - 13025817128.1
universal stress proteinshn_RS37685Not Available-130778 - 1309696738.24
hypothetical proteinshn_RS36175Not Available-131095 - 13141511498.0

Displaying genes 7121 – 7130 of 7132 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

60 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0002629(3S)-3-aminobutanoyl-CoAC25H40N8O17P3SChemical structure of (3S)-3-aminobutanoyl-CoANot available
Average849.62Da
Monoisotopic849.1461448Da
BASm0002655octadecanoyl-CoAC39H66N7O17P3SChemical structure of octadecanoyl-CoANot available
Average1029.97Da
Monoisotopic1029.347070181Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm00027912-oxopropyl-coenzyme MC5H9O4S2Chemical structure of 2-oxopropyl-coenzyme MNot available
Average197.24Da
Monoisotopic196.994774698Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0003091GDP-4-dehydro-alpha-D-rhamnoseC16H21N5O15P2Chemical structure of GDP-4-dehydro-alpha-D-rhamnoseNot available
Average585.313Da
Monoisotopic585.052036152Da
BASm0003107S-inosyl-L-homocysteineC14H19N5O6SChemical structure of S-inosyl-L-homocysteineNot available
Average385.396Da
Monoisotopic385.1056041Da
BASm00031102-dehydro-3-deoxy-D-galactonateC6H10O6Chemical structure of 2-dehydro-3-deoxy-D-galactonateNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0003204L-2-aminohexano-6-lactamC6H13N2OChemical structure of L-2-aminohexano-6-lactamNot available
Average129.182Da
Monoisotopic129.1022395Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 21–30 of 60 metabolites