Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tn3 family transposase | shn_RS34435 | P06695 | - | 91023 - 93998 | 111461.0 |
| recombinase family protein | shn_RS34440 | P05823 | + | 94153 - 94746 | 21618.1 |
| udp-glucose 4-epimerase gale | shn_RS34445 | Not Available | - | 94780 - 96282 | 56475.5 |
| udp-glucose 4-epimerase gale | shn_RS34450 | P26503 | - | 96279 - 97261 | 36066.6 |
| hypothetical protein | shn_RS36890 | Not Available | - | 97548 - 97748 | 7262.81 |
| nad-dependent epimerase/dehydratase family protein | shn_RS34455 | Q8NBZ7 | - | 97745 - 98500 | 28295.2 |
| helix-turn-helix domain-containing protein | shn_RS34460 | Not Available | + | 99350 - 100321 | 35742.7 |
| upf0104 family protein | shn_RS36615 | P75770 | + | 113 - 736 | 21189.5 |
| phospholipase d-like domain-containing protein | shn_RS29140 | P97813 | - | 634 - 2208 | 58272.9 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | shn_RS29145 | Q82SJ8 | - | 2379 - 3383 | 34535.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.