Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna repair transcriptional activator rtcr | shn_RS27115 | P38035 | - | 424649 - 426256 | 60303.6 |
| hypothetical protein | shn_RS27120 | Not Available | + | 426467 - 428023 | 56030.9 |
| rtcb family protein | shn_RS27125 | Not Available | + | 428683 - 430107 | 51619.8 |
| rna ligase rtcb family protein | shn_RS27130 | A4S3S3 | + | 430339 - 431556 | 42981.2 |
| peptide chain release factor h | shn_RS27135 | P28369 | + | 431543 - 432154 | 22128.8 |
| type ii toxin-antitoxin system vapc family toxin | shn_RS27140 | P9WF72 | - | 432466 - 432855 | 14571.6 |
| type ii toxin-antitoxin system vapb family antitoxin | shn_RS27145 | P9WJ32 | - | 432852 - 433052 | 7209.78 |
| transglutaminase family protein | shn_RS27150 | Not Available | - | 433200 - 434027 | 30691.4 |
| transglutaminase family protein | shn_RS27155 | Not Available | - | 434105 - 435001 | 33743.1 |
| helix-turn-helix domain-containing protein | shn_RS27160 | Not Available | - | 435158 - 435397 | 8764.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.