Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase | shn_RS33835 | Q52811 | + | 73764 - 74990 | 43892.1 |
| transporter substrate-binding domain-containing protein | shn_RS33840 | Q52812 | + | 74987 - 76009 | 36543.2 |
| amino acid abc transporter permease | shn_RS33845 | P45767 | + | 76071 - 77213 | 41227.3 |
| amino acid abc transporter permease | shn_RS33850 | P45768 | + | 77216 - 78289 | 38665.6 |
| amino acid abc transporter atp-binding protein | shn_RS33855 | Q52666 | + | 78289 - 79080 | 29160.7 |
| pseudoazurin | shn_RS33860 | P19567 | + | 79229 - 79684 | 16144.1 |
| copper homeostasis periplasmic binding protein copc | shn_RS35605 | Not Available | + | 79925 - 80287 | 12896.4 |
| copper homeostasis membrane protein copd | shn_RS33865 | Not Available | + | 80298 - 81140 | 30928.7 |
| transglutaminase-like cysteine peptidase | shn_RS33870 | Not Available | + | 81239 - 81841 | 22029.1 |
| mapeg family protein | shn_RS33875 | Not Available | + | 82046 - 82615 | 20026.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.