Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | shn_RS22650 | Q9HU20 | + | 46681 - 48504 | 66602.3 |
| sigma-54 dependent transcriptional regulator | shn_RS22655 | Q9HU19 | + | 48501 - 49856 | 49508.9 |
| tripartite tricarboxylate transporter substrate binding protein bugd | shn_RS22660 | P70791 | + | 50055 - 51038 | 34147.1 |
| tripartite tricarboxylate transporter tctb family protein | shn_RS22665 | Not Available | + | 51187 - 51648 | 16481.0 |
| tripartite tricarboxylate transporter permease | shn_RS22670 | P70795 | + | 51658 - 53163 | 52367.4 |
| arac family transcriptional regulator | shn_RS22675 | Not Available | + | 53294 - 54178 | 33243.8 |
| tonb-dependent siderophore receptor | shn_RS22680 | P06971 | + | 54411 - 56540 | 77341.5 |
| llm class flavin-dependent oxidoreductase | shn_RS22685 | Not Available | - | 56639 - 57661 | 37414.1 |
| ribbon-helix-helix domain-containing protein | shn_RS22690 | Not Available | - | 58090 - 58440 | 13375.1 |
| dj-1/pfpi family protein | shn_RS22695 | Q9M8R4 | - | 58464 - 59060 | 21100.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.