Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | shn_RS16055 | P0A0Q8 | - | 3332553 - 3333065 | 19082.9 |
| phenylacetic acid degradation bifunctional protein paaz | shn_RS16060 | P77455 | - | 3333073 - 3335130 | 72749.9 |
| phenylacetic acid catabolic protein | shn_RS16065 | Not Available | - | 3335174 - 3335929 | 27387.6 |
| 1,2-phenylacetyl-coa epoxidase subunit paae | shn_RS16070 | P76081 | - | 3335941 - 3337017 | 39845.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paad | shn_RS16075 | P76080 | - | 3337040 - 3337564 | 19143.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paac | shn_RS16080 | P76079 | - | 3337574 - 3338356 | 28882.5 |
| 1,2-phenylacetyl-coa epoxidase subunit paab | shn_RS16085 | P76078 | - | 3338356 - 3338640 | 10642.4 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | shn_RS16090 | P76077 | - | 3338657 - 3339661 | 37850.9 |
| 3-oxoadipyl-coa thiolase | shn_RS16095 | P0C7L2 | - | 3339685 - 3340890 | 41814.2 |
| phenylacetic acid degradation operon negative regulatory protein paax | shn_RS16100 | Not Available | - | 3341059 - 3341967 | 32686.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.