Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system-associated acyl-coa thioesterase | shn_RS15025 | P44679 | - | 3103669 - 3104145 | 17822.5 |
| holliday junction branch migration dna helicase ruvb | shn_RS15030 | A6UCT7 | - | 3104155 - 3105195 | 38332.4 |
| holliday junction branch migration protein ruva | shn_RS15035 | Q92M91 | - | 3105236 - 3105853 | 21292.6 |
| type ii toxin-antitoxin system vapc family toxin | shn_RS15040 | Not Available | - | 3105865 - 3106281 | 15629.7 |
| abrb/maze/spovt family dna-binding domain-containing protein | shn_RS15045 | Not Available | - | 3106262 - 3106522 | 9713.37 |
| crossover junction endodeoxyribonuclease ruvc | shn_RS15050 | C3MIH7 | - | 3106578 - 3107090 | 18046.0 |
| llm class flavin-dependent oxidoreductase | shn_RS15055 | P0ADV6 | + | 3107262 - 3108257 | 36082.4 |
| yebc/pmpr family dna-binding transcriptional regulator | shn_RS15060 | Q92M88 | - | 3108419 - 3109165 | 26763.3 |
| hypothetical protein | shn_RS15065 | Not Available | - | 3109337 - 3109831 | 17271.5 |
| mbl fold metallo-hydrolase | shn_RS15070 | Not Available | - | 3109848 - 3110678 | 29905.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.