Shinella sp. HZN7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusShinella
SpeciesShinella sp. HZN7
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shinella sp. HZN7

Accession NumberNZ_CP015745.1

Gene Summary

Adenine Count

24434 bp

Thymine Count

24427 bp

Guanine Count

39515 bp

Cytosine Count

39290 bp

Genome Length

127666 bp

Protein-coding Genes

128 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

13

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rok family transcriptional regulatorshn_RS23925P40981-337861 - 33906642713.4
extracellular solute-binding proteinshn_RS23930O32156+339256 - 34049444333.3
carbohydrate abc transporter permeaseshn_RS23935Not Available+340564 - 34144831945.8
carbohydrate abc transporter permeaseshn_RS23940Not Available+341448 - 34229329488.0
sis domain-containing proteinshn_RS23945Not Available+342296 - 34331235327.5
carbohydrate kinase family proteinshn_RS23950Not Available+343313 - 34423632209.1
abc transporter atp-binding proteinshn_RS23955Not Available+344233 - 34529738330.7
tonb-dependent receptorshn_RS23960A5VW32-345357 - 34766683441.2
fecr family proteinshn_RS23965Not Available-347799 - 34877935409.2
rna polymerase sigma factorshn_RS23970Not Available-348873 - 34945721699.0

Displaying genes 311 – 320 of 7132 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

12 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm00013134-sulfobenzoateC7H4O5SChemical structure of 4-sulfobenzoateNot available
Average200.17Da
Monoisotopic199.9790416Da
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm00016432,5-dichlorocyclohexa-2,5-dien-1,4-diolC6H6Cl2O2Chemical structure of 2,5-dichlorocyclohexa-2,5-dien-1,4-diolNot available
Average181.01Da
Monoisotopic179.9744848Da
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002530(E)-cinnamoyl-CoAC30H42N7O17P3SChemical structure of (E)-cinnamoyl-CoANot available
Average897.68Da
Monoisotopic897.1570751Da
BASm0002950(E)-caffeateC9H7O4Chemical structure of (E)-caffeateNot available
Average179.152Da
Monoisotopic179.0349823Da
BASm0003618(3S)-citramalyl-CoAC26H37N7O20P3SChemical structure of (3S)-citramalyl-CoANot available
Average892.6Da
Monoisotopic892.1054367Da

Displaying 1–10 of 12 metabolites