Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | shn_RS23725 | Not Available | + | 282246 - 282659 | 15102.3 |
| bifunctional diguanylate cyclase/phosphodiesterase | shn_RS23730 | Q8EJM6 | + | 282886 - 284934 | 76548.2 |
| gntr family transcriptional regulator | shn_RS23735 | Not Available | - | 284944 - 285606 | 24854.8 |
| nramp family divalent metal transporter | shn_RS23740 | P42964 | + | 285849 - 287114 | 43773.5 |
| lamb/ycsf family protein | shn_RS23745 | Q8U920 | + | 287133 - 287900 | 26655.9 |
| putative hydro-lyase | shn_RS23750 | Q8U919 | + | 287910 - 288719 | 28830.6 |
| 5-oxoprolinase/urea amidolyase family protein | shn_RS23755 | P75745 | + | 288727 - 290319 | 55709.9 |
| biotin carboxylase n-terminal domain-containing protein | shn_RS23760 | P96890 | + | 290330 - 292060 | 61116.2 |
| cupin domain-containing protein | shn_RS23765 | Not Available | - | 292264 - 293109 | 31537.2 |
| tetr/acrr family transcriptional regulator | shn_RS23770 | Not Available | - | 293138 - 293704 | 20440.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.