Shinella sp. HZN7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusShinella
SpeciesShinella sp. HZN7
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shinella sp. HZN7

NZ_CP015737.1NZ_CP015741.1NZ_CP015748.1NZ_CP015739.1NZ_CP015745.1NZ_CP015742.1NZ_CP015736.1NZ_CP015746.1NZ_CP015738.1NZ_CP015744.1NZ_CP015747.1NZ_CP015740.1NZ_CP015743.1

Gene Summary

Adenine Count

102122 bp

Thymine Count

107513 bp

Guanine Count

206401 bp

Cytosine Count

204503 bp

Genome Length

620539 bp

Protein-coding Genes

586 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

13

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
luxr family transcriptional regulatorshn_RS03780P12746+787303 - 78804027105.1
luxr family transcriptional regulatorshn_RS03785P0A3J5+788125 - 78886827897.5
mrp/nbp35 family atp-binding proteinshn_RS03790P53383+788984 - 79016541494.5
magnesium transporter cora family proteinshn_RS03795Q4QLP6+790306 - 79128936494.4
class i sam-dependent methyltransferaseshn_RS03800Q9ZHQ4+791480 - 79223528506.9
hypothetical proteinshn_RS03805Not Available-792362 - 7925988355.96
hypothetical proteinshn_RS03810Not Available-792697 - 79445465380.6
cell wall hydrolaseshn_RS03815Not Available+794893 - 79606842760.4
atpz/atpi family proteinshn_RS03820Not Available+796330 - 79672513881.7
f0f1 atp synthase subunit ashn_RS03825Q92RM8+796787 - 79753926816.6

Displaying genes 2381 – 2390 of 7132 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

60 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001375toluene-4-sulfonateC7H7O3SChemical structure of toluene-4-sulfonateNot available
Average171.19Da
Monoisotopic171.012138839Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00020302-dehydro-3-deoxy-L-fuconateC6H9O5Chemical structure of 2-dehydro-3-deoxy-L-fuconateNot available
Average161.134Da
Monoisotopic161.045547Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm00021245-dehydro-4-deoxy-D-glucarateC6H6O7Chemical structure of 5-dehydro-4-deoxy-D-glucarateNot available
Average190.1076Da
Monoisotopic190.0113525Da
BASm0002131(3S)-hydroxy-3-methylglutaryl-CoAC27H39N7O20P3SChemical structure of (3S)-hydroxy-3-methylglutaryl-CoANot available
Average906.62Da
Monoisotopic906.1183419Da
BASm0002243S-methyl-5'-thioinosineC11H14N4O4SChemical structure of S-methyl-5'-thioinosineNot available
Average298.32Da
Monoisotopic298.0735761Da
BASm0002529(3S)-3-hydroxy-L-aspartateC4H6NO5Chemical structure of (3S)-3-hydroxy-L-aspartateNot available
Average148.095Da
Monoisotopic148.0251459Da

Displaying 11–20 of 60 metabolites