Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| monovalent cation:proton antiporter-2 (cpa2) family protein | shn_RS03680 | P44933 | - | 765079 - 766863 | 63896.7 |
| tldd/pmba family protein | shn_RS03685 | P0AFK1 | + | 766974 - 768320 | 46641.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | shn_RS03690 | Q98F59 | + | 768325 - 769131 | 28255.6 |
| duf4170 domain-containing protein | shn_RS03695 | Not Available | + | 769193 - 769429 | 9001.8 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | shn_RS03700 | P44806 | + | 769538 - 770851 | 48841.4 |
| had family hydrolase | shn_RS03705 | Not Available | + | 770865 - 771599 | 25288.9 |
| tetraacyldisaccharide 4'-kinase | shn_RS03710 | Q92RP7 | + | 771930 - 772991 | 38328.1 |
| duf2093 domain-containing protein | shn_RS03715 | Not Available | - | 773096 - 773329 | 8686.32 |
| dna mismatch repair endonuclease mutl | shn_RS03720 | Q92RP4 | - | 773574 - 775382 | 64691.3 |
| response regulator | shn_RS03725 | Q54YZ9 | + | 775691 - 777388 | 62889.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.