Shinella sp. HZN7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusShinella
SpeciesShinella sp. HZN7
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shinella sp. HZN7

NZ_CP015737.1NZ_CP015741.1NZ_CP015748.1NZ_CP015739.1NZ_CP015745.1NZ_CP015742.1NZ_CP015736.1NZ_CP015746.1NZ_CP015738.1NZ_CP015744.1NZ_CP015747.1NZ_CP015740.1NZ_CP015743.1

Gene Summary

Adenine Count

102122 bp

Thymine Count

107513 bp

Guanine Count

206401 bp

Cytosine Count

204503 bp

Genome Length

620539 bp

Protein-coding Genes

586 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

13

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinshn_RS03580Not Available+741800 - 7419977146.48
histidine--trna ligaseshn_RS03585Q8UHK4+742316 - 74383955962.6
atp phosphoribosyltransferase regulatory subunitshn_RS03590A6U6I1+744018 - 74515140378.7
atp phosphoribosyltransferaseshn_RS03595A6U6I2+745148 - 74584324811.5
voc family proteinshn_RS03600Not Available-745847 - 74626915148.0
glutathione s-transferase c-terminal domain-containing proteinshn_RS03605P77526+746306 - 74701326068.3
nad(p)/fad-dependent oxidoreductaseshn_RS03610Q5S3I2+747107 - 74832443193.0
eal domain-containing proteinshn_RS03615Not Available+748510 - 751308101938.0
hypothetical proteinshn_RS03620Not Available-751315 - 75176116520.8
chaperonin groelshn_RS03625P30779-752254 - 75389457725.9

Displaying genes 2341 – 2350 of 7132 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

60 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00068025'-deoxyinosineC10H12N4O4Chemical structure of 5'-deoxyinosineNot available
Average252.23Da
Monoisotopic252.0858549Da
BASm0006909D-glucaro-1,5-lactoneC6H7O7Chemical structure of D-glucaro-1,5-lactoneNot available
Average191.116Da
Monoisotopic191.0197261Da
BASm00069333,6-anhydro-L-galactonateC6H9O6Chemical structure of 3,6-anhydro-L-galactonateNot available
Average177.133Da
Monoisotopic177.0404616Da
BASm0007089L-anticapsinC9H13NO4Chemical structure of L-anticapsinNot available
Average199.206Da
Monoisotopic199.0844579Da
BASm0007104L-dihydroanticapsinC9H15NO4Chemical structure of L-dihydroanticapsinNot available
Average201.222Da
Monoisotopic201.100108Da
BASm0007342beta-D-galacturonateC6H9O7Chemical structure of beta-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0007343beta-D-glucuronateC6H9O7Chemical structure of beta-D-glucuronateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00077204-pregnen-20,21-diol-3-oneC21H32O3Chemical structure of 4-pregnen-20,21-diol-3-oneNot available
Average332.484Da
Monoisotopic332.2351449Da
BASm00077436-deoxy-6-sulfo-D-glucono-1,5-lactoneC6H9O8SChemical structure of 6-deoxy-6-sulfo-D-glucono-1,5-lactoneNot available
Average241.19Da
Monoisotopic241.002362004Da
BASm00077446-deoxy-6-sulfo-D-gluconateC6H10O9SNot availableNot available
Average258.2Da
Monoisotopic258.005650236Da

Displaying 41–50 of 60 metabolites