Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | shn_RS02855 | H6LGM6 | + | 590239 - 591381 | 41075.4 |
| 3-ketoacyl-acp reductase | shn_RS02860 | Q49117 | + | 591378 - 592157 | 26503.9 |
| dihydrodipicolinate synthase family protein | shn_RS02865 | Not Available | + | 592168 - 593316 | 41636.1 |
| sugar phosphate isomerase/epimerase | shn_RS02870 | Not Available | + | 593319 - 594176 | 30186.9 |
| electron transfer flavoprotein subunit beta/fixa family protein | shn_RS02875 | Not Available | + | 594194 - 594943 | 26577.4 |
| electron transfer flavoprotein subunit alpha/fixb family protein | shn_RS02880 | Not Available | + | 594967 - 595896 | 31441.3 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | shn_RS02885 | Not Available | + | 595902 - 597566 | 60326.1 |
| phytanoyl-coa dioxygenase family protein | shn_RS02890 | Not Available | + | 598073 - 599182 | 39762.3 |
| sugar abc transporter substrate-binding protein | shn_RS02895 | Not Available | + | 599253 - 600197 | 33017.3 |
| abc transporter permease | shn_RS02900 | Q57HE1 | + | 600284 - 601405 | 39918.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.