Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | shn_RS02705 | Q1JUP4 | - | 557116 - 558546 | 50440.4 |
| nitronate monooxygenase family protein | shn_RS02710 | Q9I4V0 | - | 558536 - 559525 | 33583.7 |
| class i adenylate-forming enzyme family protein | shn_RS02715 | O31826 | - | 559548 - 561170 | 57665.7 |
| enoyl-coa hydratase/isomerase family protein | shn_RS02720 | Q4PEN0 | - | 561167 - 561934 | 27415.2 |
| caib/baif coa-transferase family protein | shn_RS02725 | Q7TNE1 | - | 561934 - 563121 | 42467.8 |
| enoyl-coa hydratase/isomerase family protein | shn_RS02730 | A4YI89 | - | 563121 - 563867 | 26081.7 |
| hydroxymethylglutaryl-coa lyase | shn_RS02735 | P38060 | - | 563876 - 564802 | 32949.1 |
| marr family winged helix-turn-helix transcriptional regulator | shn_RS02740 | Not Available | - | 564882 - 565448 | 21392.7 |
| abc transporter substrate-binding protein | shn_RS02745 | Not Available | + | 565626 - 566669 | 37644.4 |
| abc transporter atp-binding protein | shn_RS02750 | Q5WXF0 | + | 566692 - 567759 | 39804.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.