Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | shn_RS22455 | P40882 | - | 11442 - 11984 | 18736.4 |
| cupin domain-containing protein | shn_RS22460 | Not Available | - | 12009 - 12341 | 11824.4 |
| zinc-binding alcohol dehydrogenase family protein | shn_RS22465 | A7RK30 | - | 12351 - 13355 | 35585.0 |
| 3-keto-5-aminohexanoate cleavage protein | shn_RS22470 | Q8RHX2 | - | 13387 - 14265 | 31189.9 |
| sdr family nad(p)-dependent oxidoreductase | shn_RS22475 | P16543 | - | 14265 - 15026 | 26098.6 |
| dioxygenase | shn_RS22480 | A1IIX3 | - | 15030 - 15956 | 33565.0 |
| glutathione s-transferase family protein | shn_RS22485 | Q9VG93 | - | 15974 - 16759 | 29398.8 |
| branched-chain amino acid abc transporter permease | shn_RS22490 | Not Available | - | 16822 - 17868 | 37319.6 |
| branched-chain amino acid abc transporter permease | shn_RS22495 | Not Available | - | 17865 - 18743 | 30959.1 |
| abc transporter atp-binding protein | shn_RS22500 | P21630 | - | 18756 - 19484 | 26347.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.