Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase y family protein | shn_RS31175 | Q9A3J2 | + | 46964 - 48475 | 55583.9 |
| error-prone dna polymerase | shn_RS31180 | Q8UKK2 | + | 48472 - 51729 | 121853.0 |
| hypothetical protein | shn_RS31185 | Not Available | - | 51772 - 52563 | 28969.5 |
| hypothetical protein | shn_RS31190 | Not Available | + | 53025 - 53231 | 7834.43 |
| thermonuclease family protein | shn_RS31195 | Not Available | - | 53232 - 53723 | 16892.8 |
| hypothetical protein | shn_RS31200 | Not Available | - | 53731 - 54357 | 22359.6 |
| lytic transglycosylase domain-containing protein | shn_RS31205 | O31608 | + | 54480 - 54998 | 18800.1 |
| trbc/virb2 family protein | shn_RS31210 | Not Available | + | 55043 - 55366 | 11469.3 |
| type iv secretion system protein virb3 | shn_RS31215 | Not Available | + | 55368 - 55658 | 10949.8 |
| virb4 family type iv secretion/conjugal transfer atpase | shn_RS31220 | Q6FYW7 | + | 55655 - 58066 | 89833.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.