Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ardc family protein | shn_RS34595 | P55426 | + | 29541 - 30467 | 34508.5 |
| type ii toxin-antitoxin system vapb family antitoxin | shn_RS34600 | Not Available | + | 30613 - 30855 | 9027.73 |
| type ii toxin-antitoxin system vapc family toxin | shn_RS34605 | P67241 | + | 30855 - 31259 | 14446.3 |
| duf736 domain-containing protein | shn_RS34610 | P55425 | + | 32069 - 32386 | 11464.5 |
| is110 family transposase | shn_RS34615 | Q9HI37 | - | 32819 - 33841 | 38234.9 |
| hypothetical protein | shn_RS36745 | Not Available | + | 34044 - 34214 | 6211.34 |
| hu family dna-binding protein | shn_RS34620 | Q9CK94 | - | 34256 - 34534 | 9638.46 |
| wgr domain-containing protein | shn_RS34625 | Not Available | - | 34675 - 34932 | 9933.87 |
| ti-type conjugative transfer system protein trag | shn_RS34630 | Q44346 | - | 35182 - 37110 | 69474.6 |
| type iv conjugative transfer system coupling protein trad | shn_RS34635 | Q44361 | - | 37097 - 37312 | 7841.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.