Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | shn_RS34245 | P55463 | - | 48289 - 49191 | 32224.0 |
| dtdp-glucose 4,6-dehydratase | shn_RS34250 | P55462 | - | 49213 - 50265 | 39370.5 |
| glucose-1-phosphate thymidylyltransferase rfba | shn_RS34255 | P55464 | + | 50454 - 51338 | 32039.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | shn_RS34260 | Q9HU21 | + | 51335 - 51889 | 20512.2 |
| hypothetical protein | shn_RS34265 | Not Available | + | 51971 - 52798 | 29659.6 |
| hypothetical protein | shn_RS34270 | P57037 | - | 52842 - 54776 | 71992.6 |
| hypothetical protein | shn_RS34275 | Not Available | + | 55219 - 56514 | 48133.5 |
| type ii toxin-antitoxin system vapc family toxin | shn_RS34280 | Not Available | - | 56681 - 57079 | 14133.1 |
| abrb/maze/spovt family dna-binding domain-containing protein | shn_RS34285 | Not Available | - | 57076 - 57342 | 9572.75 |
| lyase family protein | shn_RS34290 | P26899 | - | 57583 - 58959 | 48868.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.