Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | shn_RS37740 | Not Available | - | 1552 - 2076 | 18875.8 |
| udp-glucose 4-epimerase gale | shn_RS37745 | Not Available | - | 2163 - 2333 | 6799.16 |
| s10 family peptidase | shn_RS34050 | Not Available | + | 2594 - 4051 | 52175.3 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | shn_RS34060 | Not Available | + | 4562 - 4816 | 9374.03 |
| type ii toxin-antitoxin system vapc family toxin | shn_RS34065 | Not Available | + | 4816 - 5223 | 14892.0 |
| hypothetical protein | shn_RS34070 | Not Available | + | 5321 - 5542 | 7671.93 |
| relaxase/mobilization nuclease domain-containing protein | shn_RS34075 | Not Available | - | 5550 - 7745 | 78166.2 |
| plasmid mobilization relaxosome protein mobc | shn_RS34080 | Not Available | - | 7735 - 8103 | 13687.7 |
| marr family winged helix-turn-helix transcriptional regulator | shn_RS34085 | O34777 | - | 8969 - 9421 | 16790.3 |
| alpha/beta fold hydrolase | shn_RS34090 | O31158 | + | 9563 - 10384 | 30170.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.