Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| wgr domain-containing protein | shn_RS33540 | P55422 | - | 15800 - 16141 | 13115.6 |
| type ii toxin-antitoxin system vapb family antitoxin | shn_RS33545 | Q9X7L3 | + | 16337 - 16585 | 9329.13 |
| type ii toxin-antitoxin system vapc family toxin | shn_RS33550 | Q9X7L4 | + | 16585 - 17022 | 16138.5 |
| duf1993 family protein | shn_RS33555 | Not Available | - | 17391 - 17894 | 18980.2 |
| llm class flavin-dependent oxidoreductase | shn_RS33560 | O32254 | - | 17907 - 18887 | 35257.1 |
| nad(p)-dependent alcohol dehydrogenase | shn_RS33565 | O94564 | - | 18954 - 19994 | 36536.8 |
| helix-turn-helix domain-containing protein | shn_RS33570 | Q9Z9W1 | + | 20135 - 20509 | 14188.4 |
| hypothetical protein | shn_RS33575 | Not Available | + | 21168 - 21353 | 6895.95 |
| thermonuclease family protein | shn_RS33580 | Not Available | - | 21446 - 21886 | 16330.0 |
| ti-type conjugative transfer system protein trag | shn_RS33585 | P55421 | - | 21946 - 23868 | 69133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.