Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flp family type ivb pilin | shn_RS21080 | Not Available | + | 4404734 - 4404913 | 6176.56 |
| prepilin peptidase | shn_RS21085 | Not Available | + | 4405033 - 4405536 | 17395.2 |
| flp pilus assembly protein cpab | shn_RS21090 | Not Available | + | 4405729 - 4406535 | 28040.8 |
| type ii and iii secretion system protein family protein | shn_RS21095 | P55702 | + | 4406550 - 4408097 | 54650.3 |
| cpad family pilus assembly protein | shn_RS21100 | Not Available | + | 4408109 - 4408825 | 25793.8 |
| cpae family protein | shn_RS21105 | Not Available | + | 4408887 - 4410170 | 46459.1 |
| cpaf family protein | shn_RS21110 | P9WMT2 | + | 4410207 - 4411679 | 53588.5 |
| type ii secretion system f family protein | shn_RS21115 | Not Available | + | 4411689 - 4412699 | 36850.8 |
| type ii secretion system f family protein | shn_RS21120 | Not Available | + | 4412710 - 4413693 | 36276.7 |
| tetratricopeptide repeat protein | shn_RS21125 | Not Available | - | 4413830 - 4414645 | 28856.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.