Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nfed family protein | shn_RS15315 | P0AAS3 | + | 3158022 - 3158480 | 16812.8 |
| sis domain-containing protein | shn_RS15320 | Q9HVW0 | - | 3158546 - 3159541 | 34675.1 |
| hypothetical protein | shn_RS15325 | Not Available | - | 3159789 - 3160610 | 29220.6 |
| linear amide c-n hydrolase | shn_RS15330 | Not Available | + | 3160818 - 3161882 | 38914.0 |
| outer membrane beta-barrel protein | shn_RS15335 | Not Available | + | 3162184 - 3163692 | 53895.3 |
| utp--glucose-1-phosphate uridylyltransferase galu | shn_RS15340 | P33696 | - | 3163696 - 3164583 | 32218.2 |
| lytic murein transglycosylase | shn_RS15345 | P41052 | + | 3164802 - 3166022 | 44640.2 |
| duf459 domain-containing protein | shn_RS15350 | Not Available | + | 3166154 - 3167302 | 40992.3 |
| hamp domain-containing sensor histidine kinase | shn_RS15355 | Not Available | - | 3167335 - 3168678 | 48339.5 |
| response regulator transcription factor | shn_RS15360 | Q9I0I1 | - | 3168675 - 3169340 | 24211.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.