Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | shn_RS14445 | Not Available | + | 2973287 - 2974081 | 29515.8 |
| abc transporter atp-binding protein | shn_RS14450 | P23888 | + | 2974078 - 2974761 | 24874.0 |
| capsule biosynthesis protein | shn_RS14455 | P57038 | - | 2974843 - 2976255 | 52775.4 |
| capsular polysaccharide biosynthesis protein | shn_RS14460 | Q05013 | - | 2976432 - 2978459 | 73061.9 |
| polysaccharide biosynthesis/export family protein | shn_RS14465 | P32758 | - | 2978617 - 2979834 | 42774.1 |
| hypothetical protein | shn_RS35845 | Not Available | + | 2980009 - 2980251 | 9044.94 |
| efflux rnd transporter permease subunit | shn_RS14470 | D0ZEW1 | - | 2980303 - 2983380 | 112000.0 |
| efflux rnd transporter periplasmic adaptor subunit | shn_RS14475 | D2BTK6 | - | 2983377 - 2984450 | 37064.3 |
| efflux rnd transporter periplasmic adaptor subunit | shn_RS14480 | Not Available | - | 2984447 - 2985532 | 38218.0 |
| methyl-accepting chemotaxis protein | shn_RS14485 | Not Available | - | 2986073 - 2988391 | 81476.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.