Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porin | shn_RS05900 | P55448 | + | 1231499 - 1232539 | 36933.5 |
| alpha/beta fold hydrolase | shn_RS05905 | Not Available | - | 1232682 - 1233557 | 31189.4 |
| is3 family transposase | shn_RS05910 | Not Available | - | 1233625 - 1234844 | 45401.1 |
| lytic transglycosylase domain-containing protein | shn_RS05920 | Not Available | - | 1235131 - 1237200 | 75271.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | shn_RS05925 | Q92R55 | + | 1237524 - 1238408 | 31020.2 |
| ssra-binding protein smpb | shn_RS05930 | B5ZW65 | + | 1238410 - 1238889 | 18625.4 |
| hypothetical protein | shn_RS05935 | Not Available | - | 1239017 - 1239493 | 16033.7 |
| nyn domain-containing protein | shn_RS05940 | Q31LZ8 | - | 1239724 - 1240299 | 21855.1 |
| dna-directed rna polymerase subunit omega | shn_RS05945 | Q2KAE9 | + | 1240711 - 1241115 | 14747.1 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | shn_RS05950 | Q2YN11 | + | 1241303 - 1243534 | 83716.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.