Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1214 domain-containing protein | shn_RS05435 | Not Available | - | 1130568 - 1131161 | 20604.7 |
| transglycosylase domain-containing protein | shn_RS05440 | O66874 | - | 1131191 - 1133383 | 79691.2 |
| ycgn family cysteine cluster protein | shn_RS05445 | C3M8L8 | + | 1133552 - 1134037 | 18297.2 |
| mmcq/yjbr family dna-binding protein | shn_RS05450 | Not Available | - | 1134045 - 1134377 | 11882.4 |
| hypothetical protein | shn_RS05455 | Not Available | + | 1134638 - 1135180 | 19260.8 |
| hypothetical protein | shn_RS05545 | Not Available | + | 1150729 - 1150938 | 7229.76 |
| hypothetical protein | shn_RS05550 | Not Available | + | 1151031 - 1151282 | 8292.23 |
| response regulator transcription factor | shn_RS05555 | Not Available | + | 1151332 - 1152003 | 24880.7 |
| hamp domain-containing sensor histidine kinase | shn_RS05560 | Q9I0I2 | + | 1151993 - 1153411 | 51707.9 |
| hypothetical protein | shn_RS05565 | Not Available | + | 1153679 - 1154110 | 14113.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.