Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | shn_RS05250 | Not Available | - | 1094330 - 1094830 | 18225.2 |
| hypothetical protein | shn_RS05255 | Not Available | - | 1095044 - 1095505 | 16037.6 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | shn_RS05260 | P27175 | - | 1095658 - 1097991 | 83119.5 |
| ydiu family protein | shn_RS05265 | B9JBH4 | - | 1098378 - 1099889 | 54626.8 |
| hypothetical protein | shn_RS05270 | Not Available | + | 1100043 - 1100522 | 16217.5 |
| caspase family protein | shn_RS05275 | Not Available | + | 1100661 - 1102733 | 77313.8 |
| s9 family peptidase | shn_RS05280 | O07834 | - | 1102934 - 1105027 | 77681.4 |
| duf6691 family protein | shn_RS05285 | Not Available | - | 1105096 - 1105530 | 15048.9 |
| yeee/yede family protein | shn_RS05290 | Q87AD4 | - | 1105527 - 1105937 | 13203.7 |
| sulfite-sensing transcriptional repressor bigr | shn_RS05295 | Q87AD5 | - | 1105934 - 1106242 | 11237.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.