Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | shn_RS05200 | Not Available | - | 1087389 - 1087781 | 13946.5 |
| superoxide dismutase | shn_RS05205 | Q9XD74 | + | 1087990 - 1088592 | 22502.3 |
| copg family ribbon-helix-helix protein | shn_RS05210 | Not Available | + | 1088711 - 1088968 | 9324.04 |
| type ii toxin-antitoxin system rele/pare family toxin | shn_RS05215 | Not Available | + | 1088965 - 1089273 | 11348.7 |
| yafy family protein | shn_RS05220 | Not Available | - | 1089277 - 1089975 | 26174.6 |
| lyse family translocator | shn_RS05225 | P38102 | + | 1090097 - 1090729 | 22511.2 |
| phosphatase pap2 family protein | shn_RS05230 | Not Available | - | 1090701 - 1091762 | 38058.1 |
| cytochrome c | shn_RS05235 | Q8UH04 | + | 1091969 - 1092412 | 14834.8 |
| c-type cytochrome | shn_RS05240 | Q53143 | + | 1092581 - 1093495 | 31921.2 |
| dj-1/pfpi family protein | shn_RS05245 | P96658 | - | 1093712 - 1094305 | 20247.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.