Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | shn_RS05000 | P45099 | + | 1041877 - 1042818 | 33530.6 |
| glutathione s-transferase family protein | shn_RS05005 | Not Available | - | 1042778 - 1043437 | 23880.8 |
| hypothetical protein | shn_RS36315 | Not Available | + | 1043694 - 1044077 | 13595.0 |
| pepsy-associated tm helix domain-containing protein | shn_RS05015 | Not Available | + | 1044150 - 1045529 | 49879.6 |
| copper chaperone pcu(a)c | shn_RS05020 | Not Available | + | 1045556 - 1046053 | 17444.0 |
| tigr03808 family tat-translocated repetitive protein | shn_RS05025 | Not Available | - | 1046158 - 1047528 | 47675.4 |
| eal domain-containing protein | shn_RS05030 | Not Available | + | 1047762 - 1050062 | 84336.3 |
| marr family winged helix-turn-helix transcriptional regulator | shn_RS05035 | Not Available | + | 1050126 - 1050572 | 16509.4 |
| ligase-associated dna damage response exonuclease | shn_RS05040 | Not Available | + | 1050825 - 1051835 | 36564.8 |
| cisplatin damage response atp-dependent dna ligase | shn_RS05045 | Q1II25 | + | 1052095 - 1053720 | 60701.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.