Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is66 family transposase | shn_RS04850 | Not Available | - | 1010782 - 1012434 | 61242.6 |
| is66 family insertion sequence element accessory protein tnpb | shn_RS04855 | Not Available | - | 1012497 - 1012850 | 13149.3 |
| is66-like element accessory protein tnpa | shn_RS04860 | Not Available | - | 1012847 - 1013290 | 15965.3 |
| helix-turn-helix domain-containing protein | shn_RS04865 | Not Available | - | 1013534 - 1014850 | 48647.2 |
| duf2971 domain-containing protein | shn_RS04870 | Not Available | - | 1014862 - 1015821 | 35838.0 |
| Trna-pro | Not Available | Not Available | + | 1016341 - 1016417 | Not Available |
| mgtc/sapb family protein | shn_RS04880 | Q57424 | + | 1016576 - 1017079 | 17659.9 |
| type i secretion system permease/atpase | shn_RS04885 | Q7ANN4 | + | 1017294 - 1019024 | 62365.2 |
| hlyd family type i secretion periplasmic adaptor subunit | shn_RS04890 | Q7ANN5 | + | 1019037 - 1020353 | 47681.6 |
| sulfate adenylyltransferase subunit cysn | shn_RS04895 | P56893 | - | 1020625 - 1022112 | 53931.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.