Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | shn_RS04555 | Not Available | + | 941179 - 942003 | 30122.7 |
| abc transporter atp-binding protein | shn_RS04560 | Not Available | + | 942027 - 943028 | 36149.8 |
| l-iditol 2-dehydrogenase | shn_RS04565 | Not Available | + | 943025 - 943798 | 27093.5 |
| mannitol dehydrogenase family protein | shn_RS04570 | Not Available | + | 943856 - 945340 | 53359.5 |
| sdr family nad(p)-dependent oxidoreductase | shn_RS04575 | Q1MLL4 | + | 945541 - 946314 | 27598.7 |
| cupin domain-containing protein | shn_RS04580 | Not Available | - | 946481 - 947644 | 42515.6 |
| laci family dna-binding transcriptional regulator | shn_RS04585 | P0ACQ2 | + | 947970 - 949019 | 38108.7 |
| aldolase | shn_RS04590 | Q6CZ24 | - | 949032 - 949676 | 22501.9 |
| 3-oxo-tetronate kinase | shn_RS04595 | B1M1V6 | - | 949673 - 950887 | 41750.7 |
| hpch/hpai aldolase/citrate lyase family protein | shn_RS04600 | O05151 | - | 950901 - 951707 | 28126.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.