Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf983 domain-containing protein | shn_RS04265 | Not Available | + | 882355 - 882738 | 13710.1 |
| surf1 family protein | shn_RS04270 | Q800L1 | + | 882755 - 883483 | 26580.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | shn_RS04275 | Q92RG2 | + | 883577 - 884578 | 36247.3 |
| homoserine kinase | shn_RS04280 | B5ZSW0 | + | 884774 - 885739 | 35726.9 |
| ribonuclease hi | shn_RS04285 | Q92RG0 | + | 885736 - 886182 | 16321.4 |
| peroxiredoxin | shn_RS04290 | Q69TY4 | - | 886247 - 886732 | 16823.2 |
| protein-disulfide reductase dsbd domain-containing protein | shn_RS04295 | Not Available | - | 886847 - 887632 | 27104.4 |
| yqge/algh family protein | shn_RS04300 | A6U6V8 | + | 887805 - 888410 | 21753.2 |
| csbd family protein | shn_RS04305 | Not Available | + | 888510 - 888701 | 6280.56 |
| putative zinc-binding metallopeptidase | shn_RS04310 | P9WL94 | + | 888818 - 889879 | 39904.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.