Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | shn_RS37395 | Not Available | - | 872868 - 872996 | 4932.06 |
| lysr substrate-binding domain-containing protein | shn_RS04225 | Not Available | + | 873096 - 873995 | 32904.6 |
| metalloprotease tldd | shn_RS04230 | P0AGG9 | - | 874156 - 875571 | 49954.0 |
| invasion associated locus b family protein | shn_RS04235 | Not Available | - | 875650 - 876180 | 18406.3 |
| cytochrome c oxidase subunit ii | shn_RS04240 | Q1RI44 | + | 876587 - 877471 | 32151.9 |
| cytochrome c oxidase subunit i | shn_RS04245 | P31833 | + | 877491 - 879158 | 61399.7 |
| heme o synthase | shn_RS04250 | Q92RG8 | + | 879435 - 880379 | 33562.7 |
| hypothetical protein | shn_RS35715 | Not Available | + | 880379 - 880519 | 4950.28 |
| cytochrome c oxidase assembly protein | shn_RS04255 | C3MHJ5 | + | 880522 - 881127 | 21907.3 |
| cytochrome c oxidase subunit 3 | shn_RS04260 | P06030 | + | 881187 - 882065 | 33067.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.