Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hybrid-cluster nad(p)-dependent oxidoreductase | shn_RS04025 | P75824 | + | 834162 - 835265 | 40483.6 |
| glycoside hydrolase family 25 protein | shn_RS04030 | Not Available | - | 835276 - 836370 | 39783.5 |
| ba14k family protein | shn_RS04035 | Not Available | + | 836574 - 837179 | 23356.4 |
| acyl-coa dehydrogenase | shn_RS04040 | Q5LLW7 | + | 837365 - 839161 | 62949.3 |
| crotonase/enoyl-coa hydratase family protein | shn_RS04045 | P41942 | + | 839407 - 840162 | 26543.0 |
| methyl-accepting chemotaxis protein | shn_RS04050 | G3XD24 | + | 840467 - 842560 | 73634.3 |
| sdr family oxidoreductase | shn_RS04055 | Q7A3L9 | + | 842707 - 843465 | 26385.6 |
| class i sam-dependent rna methyltransferase | shn_RS04060 | Q92RJ3 | - | 843478 - 844728 | 44259.7 |
| tlya family rna methyltransferase | shn_RS04065 | P9WJ62 | - | 844725 - 845477 | 26409.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | shn_RS04070 | Q92RJ1 | - | 845614 - 847533 | 67991.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.