Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mipa/ompv family protein | shn_RS03980 | Not Available | + | 822451 - 823260 | 28944.2 |
| 4-hydroxybenzoate octaprenyltransferase | shn_RS03985 | Q9VHS7 | + | 823337 - 824290 | 34516.3 |
| hypothetical protein | shn_RS36295 | Not Available | - | 824291 - 824461 | 6441.8 |
| duf6101 family protein | shn_RS03990 | Not Available | - | 824626 - 825189 | 20778.2 |
| duf1217 domain-containing protein | shn_RS03995 | Not Available | + | 825451 - 827772 | 84732.6 |
| fad-binding oxidoreductase | shn_RS04000 | P46681 | - | 827866 - 829296 | 50385.7 |
| l-threonylcarbamoyladenylate synthase | shn_RS04005 | Q9UYB2 | - | 829503 - 830477 | 33822.8 |
| diguanylate cyclase domain-containing protein | shn_RS04010 | Not Available | + | 830626 - 831693 | 38415.0 |
| duf6656 family protein | shn_RS04015 | Not Available | - | 831710 - 832315 | 23418.1 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | shn_RS04020 | Q52438 | + | 832916 - 834160 | 47271.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.