Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | shn_RS03880 | Q2KBV2 | - | 803975 - 804886 | 30970.1 |
| tetratricopeptide repeat protein | shn_RS03885 | Not Available | - | 804893 - 806731 | 67427.4 |
| polyprenyl synthetase family protein | shn_RS03890 | P0AD57 | - | 806895 - 807911 | 36411.8 |
| duf2007 domain-containing protein | shn_RS03895 | Not Available | + | 808020 - 808241 | 8085.93 |
| trna1(val) (adenine(37)-n6)-methyltransferase | shn_RS03900 | Not Available | + | 808238 - 809041 | 28223.3 |
| copg family ribbon-helix-helix protein | shn_RS03905 | Not Available | + | 809091 - 809354 | 9471.25 |
| type ii toxin-antitoxin system rele/pare family toxin | shn_RS03910 | Not Available | + | 809469 - 809675 | 7614.94 |
| s49 family peptidase | shn_RS03915 | Q2YMB3 | + | 809758 - 810633 | 31032.9 |
| hypothetical protein | shn_RS03920 | Not Available | + | 810661 - 810852 | 7358.87 |
| dtdp-glucose 4,6-dehydratase | shn_RS03925 | D4GU72 | + | 811119 - 812189 | 38273.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.