Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diguanylate cyclase/phosphodiesterase | shn_RS03730 | Not Available | + | 777529 - 778884 | 49485.2 |
| pilz domain-containing protein | shn_RS03735 | Not Available | + | 779000 - 779335 | 12717.5 |
| lysr substrate-binding domain-containing protein | shn_RS03740 | Not Available | - | 779339 - 780265 | 33953.8 |
| trimethylamine methyltransferase family protein | shn_RS03745 | Q24SP7 | + | 780354 - 781898 | 56052.9 |
| prc-barrel domain-containing protein | shn_RS03750 | Not Available | - | 781978 - 782691 | 24007.2 |
| smp-30/gluconolactonase/lre family protein | shn_RS03755 | Q92RN9 | - | 782888 - 783772 | 31298.1 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | shn_RS03760 | Q92RN8 | - | 783769 - 784407 | 21677.4 |
| 2-dehydro-3-deoxygalactonokinase | shn_RS03765 | Q92RN7 | - | 784465 - 785388 | 30915.2 |
| sdr family nad(p)-dependent oxidoreductase | shn_RS03770 | Q92RN6 | - | 785388 - 786155 | 26705.2 |
| iclr family transcriptional regulator | shn_RS03775 | P77300 | + | 786249 - 787040 | 28312.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.