Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7
Accession NumberNZ_CP015745.1
Gene Summary
Adenine Count
24434 bp
Thymine Count
24427 bp
Guanine Count
39515 bp
Cytosine Count
39290 bp
Genome Length
127666 bp
Protein-coding Genes
128 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-54 | shn_RS00060 | P22881 | - | 9989 - 11554 | 57148.5 |
| lps export abc transporter atp-binding protein | shn_RS00065 | P25885 | - | 11706 - 12503 | 29164.3 |
| lpta/osta family protein | shn_RS00070 | P25893 | - | 12531 - 13094 | 19703.7 |
| lps export abc transporter periplasmic protein lptc | shn_RS00075 | Not Available | - | 13102 - 13770 | 23821.9 |
| signal peptide peptidase sppa | shn_RS00080 | Q9C9C0 | + | 13983 - 14933 | 34890.4 |
| integration host factor subunit beta | shn_RS00085 | B3PZE1 | + | 14961 - 15260 | 11132.1 |
| lapa family protein | shn_RS00090 | Not Available | + | 15305 - 15649 | 12521.6 |
| carbon monoxide dehydrogenase subunit g | shn_RS00095 | Not Available | - | 15666 - 16115 | 15373.3 |
| class i sam-dependent rrna methyltransferase | shn_RS00100 | Q12LC6 | + | 16248 - 17315 | 39501.4 |
| rna methyltransferase | shn_RS00105 | P94538 | + | 17312 - 18166 | 30885.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.