Helicobacter pylori F16

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori F16 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This organism thrives optimally at a temperature of 37.0°C, which aligns with its habitat as a host-associated microbe, suggesting a preference for environments within warm-blooded hosts. As a member of the Helicobacter genus, H. pylori F16 likely exhibits the well-documented features associated with this group, including a helical morphology that may facilitate its movement through viscous environments, such as mucus layers in the gastric epithelium. Its microaerophilic nature indicates that it requires reduced levels of oxygen for growth, which is typically found in the gastric environment where it resides. This bacterium's adaptation to a host-associated lifestyle highlights its potential role in the complex interactions within the gastrointestinal microbiome, particularly in relation to the stomach's unique biochemical milieu. The ability to thrive at 37.0°C may enhance its competitive advantage in colonizing specific niches within the host, allowing for potential interactions with the host's immune responses and other microbial inhabitants. Understanding Helicobacter pylori F16's traits may provide insights into its ecological role in the gastric environment and its interactions with the host's health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainF16

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori F16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori F16


Gene Summary

Adenine Count

480399 bp

Thymine Count

482414 bp

Guanine Count

305239 bp

Cytosine Count

307347 bp

Genome Length

1575399 bp

Protein-coding Genes

1474 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
mnma/trmu family proteinHPF16_RS00080Not Available+11406 - 1245840169.8
duf5718 family proteinHPF16_RS00085Not Available+12549 - 1337631852.9
trbc/virb2 family proteinHPF16_RS00090Not Available+13521 - 1380210540.4
hypothetical proteinHPF16_RS00095Not Available+13802 - 1406510048.6
virb4 family type iv secretion/conjugal transfer atpaseHPF16_RS00100Not Available+14068 - 1643190294.0
cog3014 family proteinHPF16_RS00105Not Available+16752 - 1809251039.7
chemotaxis protein chev1HPF16_RS00110Not Available+18193 - 1915836482.1
carboxynorspermidine decarboxylaseHPF16_RS00115Not Available+19155 - 2037245859.9
lipid a 1-phosphatase lpxeHPF16_RS00120Not Available-20382 - 2091519646.7
phosphoethanolamine--lipid a transferase eptaHPF16_RS00125Not Available-20965 - 2253658954.2

Displaying genes 11 – 20 of 1474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites