Trinickia symbiotica str. JPY 581

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Trinickia

Description

Trinickia symbiotica strain JPY 581 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions, with an optimal growth temperature of 37.0°C. This strain is characterized by its non-spore-forming nature, indicating that it does not produce spores as a means of reproduction or survival under unfavorable conditions. The aerobic requirement suggests that T. symbiotica str. JPY 581 relies on oxygen for its metabolic processes, which may influence its habitat preferences and interactions within its ecosystem. Given its optimal growth temperature, this bacterium may be well-suited for environments that mimic mammalian body temperatures, potentially indicating a symbiotic relationship with host organisms. The rod shape of T. symbiotica str. JPY 581 may facilitate motility and nutrient absorption in its habitat, contributing to its ecological versatility. Further studies could elucidate the specific ecological roles this microbe plays, especially in relation to its potential interactions with other microorganisms or host organisms in its environment. Understanding these dynamics may provide insights into microbial community structures and functions, particularly in ecosystems where aerobic bacteria are prevalent.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusTrinickia
SpeciesTrinickia symbiotica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Trinickia symbiotica str. JPY 581

Accession NumberPNYC00000000.1

Gene Summary

Adenine Count

1255808 bp

Thymine Count

1244600 bp

Guanine Count

2116232 bp

Cytosine Count

2135466 bp

Genome Length

6752106 bp

Protein-coding Genes

5983 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rrna pseudouridine synthaseC0Z20_04520Not Available+979631 - 98129259149.8
ribosome maturation factor rimpC0Z20_04525Not Available+981678 - 98213316839.2
transcription termination/antitermination protein nusaC0Z20_04530Not Available+982133 - 98360855257.9
translation initiation factor if-2C0Z20_04535Not Available+983756 - 986677104492.0
30s ribosome-binding factor rbfaC0Z20_04540Not Available+986859 - 98722713878.6
trna pseudouridine(55) synthase trubC0Z20_04545Not Available+987250 - 98820333915.0
mfs transporterC0Z20_04550Not Available-988289 - 98985155472.2
emra/emrk family multidrug efflux transporter periplasmic adaptor subunitC0Z20_04555Not Available-989888 - 99115044503.9
marr family transcriptional regulatorC0Z20_04560Not Available-991230 - 99275954792.7
transcriptional regulator slyaC0Z20_04565Not Available-992756 - 99323217480.2

Displaying genes 891 – 900 of 6041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites