Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| C-5 cytosine-specific dna methylase | SAMN06295912_108151 | Not Available | + | 1994629 - 1996248 | 58466.4 |
| hypothetical protein | SAMN06295912_108152 | Not Available | + | 1996248 - 1996424 | 6319.58 |
| Attr | Not Available | Not Available | + | 1996386 - 1996399 | Not Available |
| Integrase | SAMN06295912_108153 | Not Available | + | 1996424 - 1997521 | 40817.0 |
| Prohead protease | SAMN06295912_1091 | Not Available | + | 2012820 - 2013307 | 17234.5 |
| Attl | Not Available | Not Available | + | 2013261 - 2013273 | Not Available |
| Putative portal protein | SAMN06295912_1092 | Not Available | + | 2013298 - 2014446 | 41073.9 |
| Head-tail connector | SAMN06295912_1093 | Not Available | + | 2014443 - 2014826 | 13717.3 |
| Putative site-specific integrase/recombinase | SAMN06295912_1094 | Not Available | + | 2014996 - 2016042 | 38870.2 |
| magnesium transporter | SAMN06295912_1095 | Not Available | + | 2016301 - 2017269 | 36276.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.