Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium jeanii |
| Strain | R-40508 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1375674 bp
Thymine Count
1395351 bp
Guanine Count
1153295 bp
Cytosine Count
1122712 bp
Genome Length
5047042 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate enzyme | A3K86_00140 | Not Available | + | 25497 - 26207 | 25669.4 |
| pyrroline-5-carboxylate reductase | A3K86_00145 | Not Available | + | 26348 - 27166 | 29103.0 |
| hypothetical protein | A3K86_00150 | Not Available | + | 27176 - 27733 | 20671.2 |
| yggu family protein | A3K86_00155 | Not Available | + | 27730 - 28032 | 10883.3 |
| hypothetical protein | A3K86_00160 | Not Available | + | 28170 - 28598 | 15795.8 |
| non-canonical purine ntp pyrophosphatase | A3K86_00165 | Not Available | + | 28724 - 29317 | 21288.2 |
| yggw family oxidoreductase | A3K86_00170 | Not Available | + | 29317 - 30477 | 43619.4 |
| hypothetical protein | A3K86_00175 | Not Available | - | 30562 - 30999 | 16147.4 |
| glutaminase | A3K86_00180 | Not Available | - | 31082 - 32002 | 33068.9 |
| trna (guanine-n7)-methyltransferase | A3K86_00185 | Not Available | - | 32080 - 32817 | 27948.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
