Photobacterium jeanii str. R-40508

ovoidfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium jeanii str. R-40508 is a Gram-negative, ovoid-shaped bacterium characterized as a facultative aerobe/anaerobe, exhibiting optimal growth at a temperature of 29.0°C. This microbe does not form spores, indicating a reliance on other survival mechanisms under varying environmental conditions. The Gram-negative cell wall structure of P. jeanii str. R-40508 may contribute to its adaptability in diverse habitats, allowing it to thrive in both aerobic and anaerobic environments. The ovoid morphology suggests potential adaptations for nutrient uptake and colonization in specific ecological niches. Given its optimal growth temperature, P. jeanii str. R-40508 may be well-suited for life in environments that experience moderate thermal conditions, such as shallow marine habitats or estuarine systems. This organism could play a role in nutrient cycling within these ecosystems, although specific ecological interactions remain to be elucidated. Further investigation into its metabolic capabilities and ecological roles could provide insights into its contributions to microbial communities and biogeochemical processes in its native environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium jeanii
StrainR-40508

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium jeanii str. R-40508


Gene Summary

Adenine Count

1375674 bp

Thymine Count

1395351 bp

Guanine Count

1153295 bp

Cytosine Count

1122712 bp

Genome Length

5047042 bp

Protein-coding Genes

4290 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
uroporphyrinogen iii synthaseA3K86_00590Not Available-119904 - 12065927083.6
hydroxymethylbilane synthaseA3K86_00595Not Available-120660 - 12159233825.9
adenylate cyclaseA3K86_00600Not Available+121946 - 124561100117.0
iron donor protein cyayA3K86_00605Not Available-124688 - 12499911779.5
diaminopimelate decarboxylaseA3K86_00610Not Available+125217 - 12646745918.7
diaminopimelate epimeraseA3K86_00615Not Available+126522 - 12735230419.4
hypothetical proteinA3K86_00620Not Available+127349 - 12806527379.7
tyrosine recombinase xercA3K86_00625Not Available+128062 - 12897334070.2
2-haloalkanoic acid dehalogenaseA3K86_00630Not Available+129014 - 12973026726.1
hypothetical proteinA3K86_00635Not Available-129842 - 13030017554.0

Displaying genes 121 – 130 of 4420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites