Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium jeanii |
| Strain | R-40508 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1375674 bp
Thymine Count
1395351 bp
Guanine Count
1153295 bp
Cytosine Count
1122712 bp
Genome Length
5047042 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen iii synthase | A3K86_00590 | Not Available | - | 119904 - 120659 | 27083.6 |
| hydroxymethylbilane synthase | A3K86_00595 | Not Available | - | 120660 - 121592 | 33825.9 |
| adenylate cyclase | A3K86_00600 | Not Available | + | 121946 - 124561 | 100117.0 |
| iron donor protein cyay | A3K86_00605 | Not Available | - | 124688 - 124999 | 11779.5 |
| diaminopimelate decarboxylase | A3K86_00610 | Not Available | + | 125217 - 126467 | 45918.7 |
| diaminopimelate epimerase | A3K86_00615 | Not Available | + | 126522 - 127352 | 30419.4 |
| hypothetical protein | A3K86_00620 | Not Available | + | 127349 - 128065 | 27379.7 |
| tyrosine recombinase xerc | A3K86_00625 | Not Available | + | 128062 - 128973 | 34070.2 |
| 2-haloalkanoic acid dehalogenase | A3K86_00630 | Not Available | + | 129014 - 129730 | 26726.1 |
| hypothetical protein | A3K86_00635 | Not Available | - | 129842 - 130300 | 17554.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
