Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Thermodesulfobacteria
Order
Thermodesulfobacteriales
Family
Thermodesulfobacteriaceae
Genus
Thermodesulfobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Thermodesulfobacteria |
| Order | Thermodesulfobacteriales |
| Family | Thermodesulfobacteriaceae |
| Genus | Thermodesulfobacterium |
| Species | Thermodesulfobacterium geofontis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Thermophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thermodesulfobacterium geofontis OPF15
Accession NumberNC_015682.1
Gene Summary
Adenine Count
569130 bp
Thymine Count
565332 bp
Guanine Count
253558 bp
Cytosine Count
246357 bp
Genome Length
1634377 bp
Protein-coding Genes
1649 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | TOPB45_RS04560 | Not Available | + | 867662 - 868795 | 42540.5 |
| nickel-dependent hydrogenase large subunit | TOPB45_RS04565 | Not Available | - | 868846 - 870546 | 62803.7 |
| hydrogenase small subunit | TOPB45_RS04570 | Not Available | - | 870582 - 871499 | 33520.1 |
| aldehyde ferredoxin oxidoreductase n-terminal domain-containing protein | TOPB45_RS04575 | Not Available | - | 871659 - 873620 | 74789.1 |
| arsr/smtb family transcription factor | TOPB45_RS04580 | Not Available | + | 873811 - 874152 | 13137.2 |
| permease | TOPB45_RS04585 | Not Available | + | 874152 - 875207 | 38760.5 |
| thioredoxin family protein | TOPB45_RS04590 | Not Available | + | 875250 - 875492 | 8672.89 |
| formylmethanofuran dehydrogenase subunit e family protein | TOPB45_RS08585 | Not Available | + | 875526 - 876254 | 27980.4 |
| sulfite exporter taue/safe family protein | TOPB45_RS04600 | Not Available | + | 876257 - 876973 | 26512.2 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | TOPB45_RS04605 | Not Available | + | 877176 - 878744 | 59389.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.