Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Thermodesulfobacteria
Order
Thermodesulfobacteriales
Family
Thermodesulfobacteriaceae
Genus
Thermodesulfobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Thermodesulfobacteria |
| Order | Thermodesulfobacteriales |
| Family | Thermodesulfobacteriaceae |
| Genus | Thermodesulfobacterium |
| Species | Thermodesulfobacterium geofontis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Thermophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thermodesulfobacterium geofontis OPF15
Accession NumberNC_015682.1
Gene Summary
Adenine Count
569130 bp
Thymine Count
565332 bp
Guanine Count
253558 bp
Cytosine Count
246357 bp
Genome Length
1634377 bp
Protein-coding Genes
1649 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdate abc transporter substrate-binding protein | TOPB45_RS08785 | Not Available | - | 919550 - 920350 | 29671.6 |
| winged helix-turn-helix domain-containing protein | TOPB45_RS04810 | Not Available | - | 920407 - 920811 | 15274.6 |
| division/cell wall cluster transcriptional repressor mraz | TOPB45_RS04815 | Not Available | + | 921028 - 921492 | 18302.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | TOPB45_RS04820 | Not Available | + | 921530 - 922339 | 30705.5 |
| hypothetical protein | TOPB45_RS04825 | Not Available | + | 922336 - 922683 | 13674.9 |
| hypothetical protein | TOPB45_RS04830 | Not Available | + | 922684 - 923685 | 38665.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | TOPB45_RS04835 | Not Available | + | 923682 - 925175 | 56297.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | TOPB45_RS04840 | Not Available | + | 925172 - 926587 | 53404.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | TOPB45_RS04845 | Not Available | + | 926587 - 927666 | 40416.4 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | TOPB45_RS04850 | Not Available | + | 927672 - 929075 | 52833.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.