Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mrec | PEDSA_RS00225 | Not Available | - | 48704 - 49543 | 31283.8 |
| rod shape-determining protein | PEDSA_RS00230 | Not Available | - | 49612 - 50634 | 37071.3 |
| gliding motility-associated c-terminal domain-containing protein | PEDSA_RS00235 | Not Available | + | 51252 - 61232 | 366404.0 |
| porp/sprf family type ix secretion system membrane protein | PEDSA_RS00240 | Not Available | + | 61267 - 62235 | 35779.0 |
| family 20 glycosylhydrolase | PEDSA_RS00245 | Not Available | + | 62655 - 65135 | 93238.8 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | PEDSA_RS00250 | Not Available | - | 65728 - 67257 | 56129.7 |
| duf4377 domain-containing protein | PEDSA_RS00255 | Not Available | - | 67439 - 67777 | 12711.3 |
| duf3857 domain-containing protein | PEDSA_RS00260 | Not Available | + | 67970 - 69955 | 76653.8 |
| duf3857 domain-containing protein | PEDSA_RS00265 | Not Available | + | 69952 - 71862 | 72691.0 |
| ndp-sugar synthase | PEDSA_RS00270 | Not Available | - | 71976 - 72887 | 34535.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.