Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga frappieri str. JAM7
Accession NumberNC_017856.1
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | Q7C_RS03610 | Not Available | - | 794439 - 796394 | 72349.9 |
| dtdp-4-dehydrorhamnose reductase | Q7C_RS03615 | Not Available | - | 796468 - 797328 | 31508.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | Q7C_RS03620 | Not Available | - | 797329 - 797874 | 20688.6 |
| glucose-1-phosphate thymidylyltransferase rfba | Q7C_RS03625 | Not Available | - | 797874 - 798758 | 32551.1 |
| dtdp-glucose 4,6-dehydratase | Q7C_RS03630 | Not Available | - | 798755 - 799828 | 40356.6 |
| nad(p)-dependent alcohol dehydrogenase | Q7C_RS03635 | Not Available | + | 800100 - 801155 | 38101.8 |
| lysr family transcriptional regulator | Q7C_RS03640 | Not Available | - | 801176 - 802087 | 33903.2 |
| mfs transporter | Q7C_RS03645 | Not Available | + | 802165 - 803373 | 43538.6 |
| efflux rnd transporter periplasmic adaptor subunit | Q7C_RS03650 | Not Available | + | 803413 - 804621 | 45262.4 |
| efflux rnd transporter permease subunit | Q7C_RS03655 | Not Available | + | 804634 - 807804 | 114341.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.