Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga frappieri str. JAM7
Accession NumberNC_017856.1
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system lipoprotein trav | Q7C_RS02580 | Not Available | - | 574614 - 575186 | 20364.9 |
| trab/virb10 family protein | Q7C_RS02585 | Not Available | - | 575261 - 576550 | 46296.3 |
| trak domain-containing protein | Q7C_RS02590 | Not Available | - | 576550 - 577449 | 32661.3 |
| trae/trak family type iv conjugative transfer system protein | Q7C_RS02595 | Not Available | - | 577433 - 578059 | 24050.5 |
| type iv conjugative transfer system protein tral | Q7C_RS02600 | Not Available | - | 578056 - 578337 | 10410.0 |
| type ii toxin-antitoxin system rele/pare family toxin | Q7C_RS02605 | Not Available | + | 578518 - 578841 | 12282.1 |
| helix-turn-helix domain-containing protein | Q7C_RS02610 | Not Available | + | 578838 - 579116 | 10517.7 |
| duf4400 domain-containing protein | Q7C_RS02615 | Not Available | - | 579142 - 579777 | 24152.4 |
| hypothetical protein | Q7C_RS02620 | Not Available | - | 579764 - 580324 | 21526.6 |
| conjugative transfer system coupling protein trad | Q7C_RS02625 | Not Available | - | 580334 - 582154 | 67130.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.